Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932670.1_cds_XP_016479112.1_70685
CDS Infomation

[gene=LOC107800460] [db_xref=GeneID:107800460] [protein=putative calcium-transporting ATPase 11, plasma membrane-type] [protein_id=XP_016479112.1] [location=join(25904..25928,26028..28009,28097..28285)] [gbkey=CDS]
Sequence

ATGGCAGCACTCAAGTTCATGGATGCTTGTGAGTACAATAAGCCTCCAGGGCTGGTCAGC
GATGGTGGTGGCGCTGAACTGGAAAATTACTTGTCAGAAGAAACTCGAGAAGCATGTTTA
GGACTTCATCCAGATAGACTTGCATCTATTGTTAGTTCCTACGACATCAAAACCTTAAAT
AAAATAGGAGGAGTTGAAGGGATCGCAAGTAGGCTGAGAGTCTCATTGGATGAAGGAGTG
AAAAAAAGTGATGTGCATATCAGACAAAATATATATGGATCGAACAAATACATTGAGAAA
CCTTTTAAAAGTTTTTGGACTTTTACATGGGAGGCTTTGCAGGATATAACTCTCATCATC
CTCATGGTTTGTGCTGTTGTCTCTATTGGTGTGGCGCTTGCCACCAAAGGGTGGCCAAAA
GGAACATATGACGGGCTGGGAATTCTACTTAGCATATTCTTGGTAGTCATAGTTACTGCA
ATTAGCGACTACAAGCAGTCATTGCAGTTCAGGGATTTGGATAAGGAGAAGAAAAAGATA
TTTATCCAGGTCACAAGAGATGGATCCAGGCAGAAGGTTTCCATTTATGACTTGGTGGTT
GGTGACGTAGTTCACTTATCTATGGGGGATCTGATTCCCGCTGATGGAATATTCATATCT
GGATACAGCTTGCTAATTGATCAATCAAGCCTATCTGGTGAGAGTGTACCCGTAAGCATA
TATGAAGGAAGACCTTTTCTTCTATCTGGAACCAAAGTGCAAGATGGTTCAGCTAAGATG
CTAGTAACAACTGTTGGAATGAGAACCGAATGGGGTAAGCTGATGGAGAGGCTAACAGAT
GGGGTAGAAGATGAGACTCCTCTGCAAGTTAAGTTGAGTGGTGTTGCTACCATTATTGGA
AAGATAGGACTAGCATTTGGTCTGCTTACATTTATGGTGTTGACAGTCAGATTTATGGTA
GAGAAAATACTTCACCACGAGCTCACGAAATGGTCTTCGAGTGATGCACTTACTCTTCTA
AATTACCTCGTGACAGCAGTGACTATAATTGTTGTTGCAGTTCCAGAAGGACTGCCTCTG
GCAGTGACGTTGAGTCTTGCATTTGCAATGAAAAAGCTAATGGACAACCAGGCATTAGTG
AGGCATCTTTCTGCATGTGAGACAATGGGTTCAGCTACTTGCATATGCACAGATAAGACA
GGAACACTTACTACAAACCAAATGGTAGTCAAGAAGATATGGATTTGTGAAAAAACTAAA
AAGGTAGAAACTGATGGAGGTGGGGATGCAGTAACTTTGAATATATCAGAAAATGCATTG
GCCTTTCTTTTACAGGCAATATTTCACAATACGGGAGCAGAGGTAGTTAAGGATCATGAT
GGAAACAAGTCGATTCTGGGAACACCAACAGAATCAGCAATATTAGATTATGGATTGCTT
CTTGGTGGTAATATTTATGAGCAAAGGAAGGACTGTAAATTCCTAAAAGTTGAGCCTTTC
AATTCAGAAAAGAAAAAGATGTCTGTGCTTATTGCTCTCCCAGATGGCAAAGTCCGAGCT
TTCTGCAAGGGTGCATCTGAGATAATCCTAAAAATGTGTGACAGTCTTATTGATCTTAAT
GGTGAAATTGTTCCTCTGACAGAAAATAGAATAAGAAATATTATGGATGTCATTAGTGAA
TTCGCTGGCGAAGCCTTGCGTACTCTTTGTGTGGCCTTCAAGGACTTTGAGGATGGCTGT
GAAGAAAATATTATTCCTGATAGTGGCTACACATTGTTAGCTATTATTGGGATTAAAGAT
CCAGTTCGTCCTGGGGTTAACAAGGCAGTAAAAACATGTTTAGCTGCTGGAATTACTGTG
CGAATGGTCACCGGTGACAATATTAATACAGCCAAAGCCATTGCTAAAGAATGTGGGATA
CTAACTGCTGATGGTTTGGTCATTGAAGGCCCAGATTTTCGGGACAAAACTCCTGATGAG
ATGAGGCAAATAATTCCTAGAATTCAGGTGATGGCGCGATCATCACCAACGGACAAGCTT
GTGTTGGTAAAGAATTTGAGAGGTATGTTTAAAGAGATTGTTGCAGTTACTGGTGATGGC
ACGAATGATGCCCCTGCTCTCCGTGAGGCAGATATTGGACTTGCTATGGGTATAGCAGGA
ACCGAGGTTTGTAGATTTGCTCCTGTTTTAGGTTAA

Peptide Sequence

PEP ID

XP_016479112.1
PEP Infomation

PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type [Nicotiana tabacum]
Sequence

MAALKFMDACEYNKPPGLVSDGGGAELENYLSEETREACLGLHPDRLASIVSSYDIKTLN
KIGGVEGIASRLRVSLDEGVKKSDVHIRQNIYGSNKYIEKPFKSFWTFTWEALQDITLII
LMVCAVVSIGVALATKGWPKGTYDGLGILLSIFLVVIVTAISDYKQSLQFRDLDKEKKKI
FIQVTRDGSRQKVSIYDLVVGDVVHLSMGDLIPADGIFISGYSLLIDQSSLSGESVPVSI
YEGRPFLLSGTKVQDGSAKMLVTTVGMRTEWGKLMERLTDGVEDETPLQVKLSGVATIIG
KIGLAFGLLTFMVLTVRFMVEKILHHELTKWSSSDALTLLNYLVTAVTIIVVAVPEGLPL
AVTLSLAFAMKKLMDNQALVRHLSACETMGSATCICTDKTGTLTTNQMVVKKIWICEKTK
KVETDGGGDAVTLNISENALAFLLQAIFHNTGAEVVKDHDGNKSILGTPTESAILDYGLL
LGGNIYEQRKDCKFLKVEPFNSEKKKMSVLIALPDGKVRAFCKGASEIILKMCDSLIDLN
GEIVPLTENRIRNIMDVISEFAGEALRTLCVAFKDFEDGCEENIIPDSGYTLLAIIGIKD
PVRPGVNKAVKTCLAAGITVRMVTGDNINTAKAIAKECGILTADGLVIEGPDFRDKTPDE
MRQIIPRIQVMARSSPTDKLVLVKNLRGMFKEIVAVTGDGTNDAPALREADIGLAMGIAG
TEVCRFAPVLG

Transcript Sequence

Gene sequence data has not been registered.